bin/combineMUMs
bin/delta-filter
bin/dnadiff
bin/exact-tandems
bin/mummer
bin/mummer-annotate
bin/mummerplot
bin/nucmer
bin/promer
bin/repeat-match
bin/show-aligns
bin/show-coords
bin/show-diff
bin/show-snps
bin/show-tiling
include/mummer-4.0.0rc1/include/compactsufsort/compactsufsort.hpp
include/mummer-4.0.0rc1/include/compactsufsort/compactsufsort_imp.hpp
include/mummer-4.0.0rc1/include/compactsufsort/const_iterator_traits.hpp
include/mummer-4.0.0rc1/include/compactsufsort/divsufsort_private.h
include/mummer-4.0.0rc1/include/compactsufsort/said_traits.hpp
include/mummer-4.0.0rc1/include/compactsufsort/sssort_imp.hpp
include/mummer-4.0.0rc1/include/compactsufsort/trsort_imp.hpp
include/mummer-4.0.0rc1/include/jellyfish/circular_buffer.hpp
include/mummer-4.0.0rc1/include/jellyfish/cooperative_pool2.hpp
include/mummer-4.0.0rc1/include/jellyfish/cpp_array.hpp
include/mummer-4.0.0rc1/include/jellyfish/divisor.hpp
include/mummer-4.0.0rc1/include/jellyfish/stream_manager.hpp
include/mummer-4.0.0rc1/include/jellyfish/whole_sequence_parser.hpp
include/mummer-4.0.0rc1/include/mt_skip_list/common.hpp
include/mummer-4.0.0rc1/include/mt_skip_list/set.hpp
include/mummer-4.0.0rc1/include/mummer/48bit_index.hpp
include/mummer-4.0.0rc1/include/mummer/48bit_iterator.hpp
include/mummer-4.0.0rc1/include/mummer/const_iterator_traits.hpp
include/mummer-4.0.0rc1/include/mummer/delta.hh
include/mummer-4.0.0rc1/include/mummer/dset.hpp
include/mummer-4.0.0rc1/include/mummer/fasta.hpp
include/mummer-4.0.0rc1/include/mummer/mgaps.hh
include/mummer-4.0.0rc1/include/mummer/nucmer.hpp
include/mummer-4.0.0rc1/include/mummer/openmp_qsort.hpp
include/mummer-4.0.0rc1/include/mummer/postnuc.hh
include/mummer-4.0.0rc1/include/mummer/redirect_to_pager.hpp
include/mummer-4.0.0rc1/include/mummer/sparseSA.hpp
include/mummer-4.0.0rc1/include/mummer/sparseSA_imp.hpp
include/mummer-4.0.0rc1/include/mummer/sw_align.hh
include/mummer-4.0.0rc1/include/mummer/sw_alignscore.hh
include/mummer-4.0.0rc1/include/mummer/tigrinc.hh
include/mummer-4.0.0rc1/include/mummer/timer.hpp
include/mummer-4.0.0rc1/include/mummer/translate.hh
include/mummer-4.0.0rc1/include/thread_pipe.hpp
include/mummer-4.0.0rc1/include/thread_pipe/circular_buffer.hpp
include/mummer-4.0.0rc1/include/thread_pipe/cooperative_pool2.hpp
include/mummer-4.0.0rc1/include/thread_pipe/divisor.hpp
include/mummer-4.0.0rc1/include/thread_pipe/traits.hpp
lib/libumdmummer.so
lib/libumdmummer.so.0
lib/libumdmummer.so.0.0.0
lib/mummer/Foundation.pm
lib/mummer/tandem-repeat.awk
libdata/pkgconfig/mummer.pc
libexec/mummer/mgaps
libexec/mummer/nucmer_ori
libexec/mummer/postnuc
libexec/mummer/postpro
libexec/mummer/prenuc
libexec/mummer/prepro