bin/alf
bin/bam2roi
bin/bed_sort.sh
bin/bisar
bin/casbar
%%RM_I386%%bin/compute_gain
bin/dfi
%%RM_I386%%bin/fiona
bin/four2three
bin/fx_bam_coverage
bin/gff_sort.sh
bin/gustaf
bin/gustaf_mate_joining
bin/insegt
bin/mason_frag_sequencing
bin/mason_genome
bin/mason_materializer
bin/mason_methylation
bin/mason_simulator
bin/mason_splicing
bin/mason_variator
bin/micro_razers
bin/pair_align
bin/param_chooser
bin/plot.awk
bin/ps2pswLinks.gawk
bin/rabema_build_gold_standard
bin/rabema_evaluate
bin/rabema_prepare_sam
bin/razers
bin/razers3
bin/rep_sep
bin/roi_feature_projection
bin/roi_plot_9.sh
bin/roi_plot_thumbnails
bin/roi_sort.sh
bin/s4_join
bin/s4_search
bin/sak
bin/sam2matrix
bin/samcat
bin/seqan_tcoffee
bin/seqcons2
bin/sgip
bin/snp_store
%%RM_I386%%bin/splazers
bin/stellar
bin/tree_recon
bin/yara_indexer
bin/yara_mapper
share/man/man1/sak.1.gz
share/doc/alf/LICENSE
share/doc/alf/README
share/doc/alf/example/small.fasta
share/doc/bs_tools/LICENSE
share/doc/bs_tools/README
share/doc/dfi/LICENSE
share/doc/dfi/README
share/doc/dfi/example/fasta1.fa
share/doc/dfi/example/fasta2.fa
%%RM_I386%%share/doc/fiona/LICENSE
%%RM_I386%%share/doc/fiona/README
%%RM_I386%%share/doc/fiona/example/reads.fa
share/doc/fx_tools/LICENSE
share/doc/fx_tools/README
share/doc/gustaf/LICENSE
share/doc/gustaf/README
share/doc/gustaf/example/adeno.fa
share/doc/gustaf/example/adeno_modified.fa
share/doc/gustaf/example/adeno_modified_reads.fa
share/doc/gustaf/example/stellar.gff
share/doc/insegt/LICENSE
share/doc/insegt/README
share/doc/insegt/example/annoOutput.gff
share/doc/insegt/example/annotations.gff
share/doc/insegt/example/readOutput.gff
share/doc/insegt/example/tupleOutput.gff
share/doc/mason2/LICENSE
share/doc/mason2/README
share/doc/mason2/README.mason_frag_sequencing
share/doc/mason2/README.mason_genome
share/doc/mason2/README.mason_materializer
share/doc/mason2/README.mason_methylation
share/doc/mason2/README.mason_simulator
share/doc/mason2/README.mason_splicing
share/doc/mason2/README.mason_variator
share/doc/mason2/example/adeno_virus.fa
share/doc/micro_razers/LICENSE
share/doc/micro_razers/README
share/doc/micro_razers/example/genome.fa
share/doc/micro_razers/example/reads.fa
share/doc/micro_razers/example/reads.fa.result
share/doc/ngs_roi/LICENSE
share/doc/ngs_roi/R/ngsroi_0.1.tar.gz
share/doc/ngs_roi/R/ngsroi_0.1.zip
share/doc/ngs_roi/README
share/doc/ngs_roi/example/dmel.bed
share/doc/ngs_roi/example/dmel.gtf
share/doc/ngs_roi/example/example.bam
share/doc/pair_align/LICENSE
share/doc/pair_align/README
share/doc/param_chooser/LICENSE
share/doc/param_chooser/README
share/doc/rabema/LICENSE
share/doc/rabema/README
share/doc/razers/LICENSE
share/doc/razers/README
share/doc/razers/example/genome.fa
share/doc/razers/example/reads.fa
share/doc/razers/example/reads2.fa
share/doc/razers3/LICENSE
share/doc/razers3/README
share/doc/razers3/example/genome.fa
share/doc/razers3/example/reads.fa
share/doc/razers3/example/reads2.fa
share/doc/rep_sep/LICENSE
share/doc/rep_sep/README
share/doc/sak/LICENSE
share/doc/sak/README
share/doc/sak/README.sak.txt
share/doc/sam2matrix/LICENSE
share/doc/sam2matrix/README
share/doc/samcat/LICENSE
share/doc/samcat/README
share/doc/searchjoin/LICENSE
share/doc/searchjoin/README
share/doc/seqan_tcoffee/LICENSE
share/doc/seqan_tcoffee/README
share/doc/seqan_tcoffee/example/seq.fa
share/doc/seqcons2/LICENSE
share/doc/seqcons2/README
share/doc/sgip/LICENSE
share/doc/sgip/README
share/doc/sgip/example/iso_m2D_m196.A01
share/doc/sgip/example/iso_r01_m200.A00
share/doc/sgip/example/iso_r01_m200.A01
share/doc/sgip/example/iso_r01_m200.B00
share/doc/sgip/example/iso_r01_m200.B01
share/doc/sgip/example/latin-4
share/doc/sgip/example/lattice-4
share/doc/sgip/example/sts-7
share/doc/snp_store/LICENSE
share/doc/snp_store/README
share/doc/snp_store/example/exampleGenome.fa
share/doc/snp_store/example/exampleReads.gff
%%RM_I386%%share/doc/splazers/LICENSE
%%RM_I386%%share/doc/splazers/README
%%RM_I386%%share/doc/splazers/example/genome.fa
%%RM_I386%%share/doc/splazers/example/reads.fa
%%RM_I386%%share/doc/splazers/example/reads.fa.result
share/doc/stellar/LICENSE
share/doc/stellar/README
share/doc/stellar/example/NC_001474.fasta
share/doc/stellar/example/NC_001477.fasta
share/doc/stellar/example/reads.fasta
share/doc/tree_recon/LICENSE
share/doc/tree_recon/README
share/doc/tree_recon/example/example.dist
share/doc/yara/LICENSE
share/doc/yara/README.rst